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Mulholland P.J, Webster J.R.  2010.  Nutrient dynamics in streams and the role of J-NABS. Journal of the North American Benthological Society. 29:100–117.
Mulholland P.J, Roberts BJ, Hill WR, Smith JG.  2009.  Stream ecosystem responses to the 2007 spring freeze in the southeastern United States: unexpected effects of climate change. Global Change Biology. 15:1767–1776.
Mulholland P.J, Hall RO, Sobota DJ, Dodds WK, G SE, Grimm NB, Hamilton S.K, Mcdowell WH, Brien JMO, Tank JL et al..  2009.  Nitrate removal in stream ecosystems measured by experiments: Denitrification 15N addition. Limnology and Oceanography. 54:666–680.
Mulholland P.J, Helton AM, Poole GC, Hall RO, Hamilton S.K, Peterson B, Tank JL, Ashkenas LR, Cooper LW, Dahm CN et al..  2008.  Stream denitrification across biomes and its response to anthropogenic nitrate loading.. Nature. 452:202–5.
Mulholland P.J, Houser J, Maloney K.  2005.  Stream diurnal dissolved oxygen profiles as indicators of in-stream metabolism and disturbance effects: Fort Benning as a case study. Ecological Indicators. 5:243–252.
Mulholland P.J.  2004.  The importance of in-stream uptake for regulating stream concentrations and outputs of N and P from a forested watershed: evidence from long-term chemistry records for Walker Branch Watershed. Biogeochemistry. 70:403–426.
Mulholland P.J, H. Valett M, Webster J.R, Thomas S, Cooper LW, Hamilton S.K, Peterson B.  2004.  Stream denitrification and total nitrate uptake rates measured using a field 15N tracer addition approach. Limnology and Oceanography. 49:809–820.
Mulholland P.J, Tank JL, Webster J.R, Bowden W.B, Dodds WK, Gregory SV, Grimm NB, Hamilton S.K, Johnson SL, Martí E. et al..  2002.  Can Uptake Length in Streams Be Determined by Nutrient Addition Experiments? Results from an Interbiome Comparison Study Journal of the North American Benthological Society. 21:544–560.
Mulholland P.J, Fellows C.S, Tank JL, Grimm NB, Webster J.R, Hamilton S.K, Martí E., Ashkenas LR, Bowden W.B, Dodds WK et al..  2001.  Inter-biome comparison of factors controlling stream metabolism. Freshwater Biology. 46:1503–1517.
Mulholland P.J, Tank JL, Sanzone DM, Wollheim WM, Peterson B, Webster J.R, Meyer JL.  2000.  Food Resources of Stream Macroinvertebrates Determined by Natural-Abundance Stable C and N Isotopes and a 15 N Tracer Addition. Journal of the North American Benthological Society. 19:145.
Mulholland P.J, Tank JL, Sanzone DM, Wollheim WM, Peterson B, Webster J.R, Meyer JL.  2000.  Nitrogen Cycling in a Forest Stream Determined by a 15 N Tracer Addition. Ecological Monographs. 70:471.